STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106944644Cystatin domain-containing protein; Belongs to the cystatin family. (101 aa)    
Predicted Functional Partners:
LOC106943871
TNF superfamily member 13b; Belongs to the tumor necrosis factor family.
    
   0.909
LOC106957399
Cathepsin Bb; Belongs to the peptidase C1 family.
   
 0.844
LOC106941858
Cathepsin Ba; Belongs to the peptidase C1 family.
   
 0.844
LOC106947091
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
    
   0.776
LOC106963144
Aurora kinase B; Belongs to the protein kinase superfamily.
   
 0.649
LOC106965150
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.649
ENSPLAP00000000046
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.638
LOC106949375
Ubiquinol-cytochrome c reductase, complex III subunit X.
   
 
 0.614
ENSPLAP00000016728
Inhibitor_I29 domain-containing protein.
    
 0.581
ctsh
Cathepsin H; Belongs to the peptidase C1 family.
    
 0.581
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.