STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106955227Homeobox domain-containing protein. (390 aa)    
Predicted Functional Partners:
irx3
Iroquois homeobox 3a.
   
  
 0.674
shox
Short stature homeobox.
    
 
 0.573
ENSPLAP00000007892
Uncharacterized protein.
    
 0.529
hnf1b
HNF1 homeobox Ba.
    
 0.528
TSHZ3
Teashirt zinc finger homeobox 3.
    
 0.519
LOC106941226
Teashirt zinc finger homeobox 3b.
    
 0.519
hhex
Homeobox domain-containing protein.
    
 
 0.512
hnf1a
HNF1 homeobox a.
    
 0.504
yap1
Yes-associated protein 1.
    
 0.502
foxn4
Forkhead box N4.
   
 
 0.502
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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