Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
LOC106959928Neurobeachin b. (2701 aa)    
Predicted Functional Partners:
LOC106963330
Notch receptor 1a.
    
  0.606
LOC106954293
Notch receptor 1b.
    
  0.606
GJD2
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.509
tbc1d31
TBC1 domain family, member 31.
      
 0.508
ctps1
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
      
 0.505
urb1
URB1 ribosome biogenesis homolog.
      
 0.470
ENSPLAP00000014622
PDZ domain-containing protein.
    
 0.462
dlg4
Discs, large homolog 4a (Drosophila); Belongs to the MAGUK family.
    
 0.462
ENSPLAP00000028739
Discs, large homolog 4b (Drosophila).
    
 0.462
ENSPLAP00000013170
Uncharacterized protein.
    
  0.455
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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