Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001432Uncharacterized protein. (1227 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.958
LOC106963833
Junction plakoglobin a.
   
 0.939
LOC106953978
Uncharacterized protein.
   
 0.899
LOC106941825
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.861
LOC106939881
Uncharacterized protein.
    
 0.861
LOC106939882
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.861
ENSPLAP00000026705
Uncharacterized protein.
    
 0.861
LOC106956294
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.861
cdh11
Cadherin 11, type 2, OB-cadherin (osteoblast); Cadherins are calcium-dependent cell adhesion proteins.
    
 0.857
CDH7
Cadherin 7; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.857
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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