Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001434Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (69 aa)    
Predicted Functional Partners:
VAMP3
Vesicle associated membrane protein 3.
    
 0.844
LOC106949858
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.840
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.840
exoc7
Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
   
 0.830
exoc5
Exocyst complex component 5.
    
 0.826
exoc4
Exocyst complex component 4.
    
 0.806
stx19
t-SNARE coiled-coil homology domain-containing protein.
   
 0.780
LOC106935024
Syntaxin 1B; Belongs to the syntaxin family.
   
 0.771
LOC106952934
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.771
LOC106956575
t-SNARE coiled-coil homology domain-containing protein.
   
 0.759
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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