STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pxmp2Peroxisomal membrane protein 2; Belongs to the peroxisomal membrane protein PXMP2/4 family. (194 aa)    
Predicted Functional Partners:
LOC106936733
Peroxisomal biogenesis factor 19.
    
 0.851
LOC106936741
Uncharacterized protein.
    
 0.851
pex3
Peroxisomal biogenesis factor 3.
   
 
 0.815
pxmp4
Peroxisomal membrane protein 4; Belongs to the peroxisomal membrane protein PXMP2/4 family.
     
 0.765
pex16
Peroxisomal membrane protein PEX16.
   
 
 0.751
pex11b
Peroxisomal biogenesis factor 11 beta.
   
 
 0.737
pex13
SH3 domain-containing protein.
   
 
 0.736
LOC106964349
Peroxisomal biogenesis factor 11 alpha.
   
 
 0.729
LOC106953403
Peroxisomal biogenesis factor 11 alpha.
   
 
 0.729
abcd3
ATP-binding cassette, sub-family D (ALD), member 3a.
    
 0.727
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.