close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arhgef11Rho guanine nucleotide exchange factor (GEF) 11. (1147 aa)    
Predicted Functional Partners:
LOC106952122
Guanine nucleotide binding protein (G protein), alpha 13b.
    
 0.962
LOC106939093
Uncharacterized protein.
    
 0.962
ENSPLAP00000020748
Uncharacterized protein.
    
 0.962
LOC106965113
Uncharacterized protein.
   
 0.956
LOC106960333
Uncharacterized protein.
   
 0.956
LOC106960220
Uncharacterized protein.
   
 0.956
LOC106959654
Uncharacterized protein.
   
 0.953
LOC106962714
Uncharacterized protein.
   
 0.953
LOC106964421
Ras homolog family member Ca.
   
 0.826
RND3
Rho family GTPase 3a.
   
 0.758
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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