STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001468Ubiquitin-like domain-containing protein. (92 aa)    
Predicted Functional Partners:
LOC106952860
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.999
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.998
ubxn7
UBX domain protein 7.
    
 0.997
fancm
Uncharacterized protein.
   
 0.995
trip12
Thyroid hormone receptor interactor 12.
   
 0.974
nbr1
NBR1 autophagy cargo receptor a.
   
 0.960
traf7
TNF receptor-associated factor 7.
    
 0.949
rps25
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.940
rps18
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
 0.931
rps8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.929
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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