Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106963381Noggin; Belongs to the noggin family. (262 aa)    
Predicted Functional Partners:
aven
Apoptosis, caspase activation inhibitor.
      
 0.663
syngr2
Synaptogyrin.
      
 0.609
LOC106936697
Synaptogyrin.
      
 0.609
LOC106955591
Uncharacterized protein.
      
 0.564
ENSPLAP00000024270
Uncharacterized protein.
      
 0.564
ANKFN1
Ankyrin repeat and fibronectin type III domain containing 1.
      
 0.564
ENSPLAP00000018376
Uncharacterized protein.
      
 0.552
ENSPLAP00000022131
Uncharacterized protein.
      
 0.552
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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