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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001478Coiled-coil domain containing 9. (350 aa)    
Predicted Functional Partners:
ENSPLAP00000027424
WD repeat domain 18.
   
 0.596
eif4a3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
  0.582
ENSPLAP00000012859
Rhomboid, veinlet-like 3 (Drosophila).
    
  0.580
znf593
Zinc finger protein 593.
   
 
 0.568
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.546
tex10
Testis expressed 10.
    
 0.540
ripk4
Receptor-interacting serine-threonine kinase 4.
    
  0.511
ENSPLAP00000028939
Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily.
    
  0.511
dalrd3
DALR anticodon binding domain containing 3.
    
 
 0.510
ncbp3
Nuclear cap binding subunit 3.
    
   0.508
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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