STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
golga4Golgin A4. (2055 aa)    
Predicted Functional Partners:
arl1
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.973
gcc1
GRIP and coiled-coil domain containing 1.
     
 0.812
gcc2
GRIP domain-containing protein.
   
 
 0.773
vrk2
VRK serine/threonine kinase 2; Belongs to the protein kinase superfamily.
    
 0.724
vrk1
VRK serine/threonine kinase 1; Belongs to the protein kinase superfamily.
    
 0.724
LOC106937352
Uncharacterized protein.
    
  0.717
LOC106960967
Protein phosphatase 2, regulatory subunit A, beta b.
    
  0.712
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
    
 0.711
tmf1
TATA element modulatory factor 1.
   
 
 0.693
LOC106950427
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.689
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.