STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
golga4Golgin A4. (2055 aa)    
Predicted Functional Partners:
arl1
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.975
trip11
Thyroid hormone receptor interactor 11.
   
 0.907
gcc1
GRIP and coiled-coil domain containing 1.
   
 
 0.883
gcc2
GRIP domain-containing protein.
   
 0.868
cenpj
Centromere protein J.
    
 0.818
LOC106935955
Nucleolar protein 11.
   
   0.800
utp4
UTP4 small subunit processome component.
    
   0.780
exoc1
Exocyst complex component 1.
    
   0.768
mzt1
Mitotic spindle organizing protein 1.
    
 0.739
LOC106960967
Protein phosphatase 2, regulatory subunit A, beta b.
    
  0.739
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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