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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
agr2Anterior gradient 2. (166 aa)    
Predicted Functional Partners:
SPDEF
SAM pointed domain containing ETS transcription factor.
   
  
 0.628
LOC106945911
Anterior gradient 1.
  
   
0.602
LOC106965287
Transcriptional and immune response regulator a.
      
 0.589
erp27
Uncharacterized protein.
    
 
 0.540
ENSPLAP00000001245
Jacalin-type lectin domain-containing protein.
      
 0.537
LOC106936785
Dystroglycan 1.
    
 
 0.522
LOC106954882
Peptidase S72 domain-containing protein.
    
 
 0.522
gdf5
Growth differentiation factor 5.
      
 0.516
wwox
WW domain containing oxidoreductase.
      
 0.511
pik3ip1
Phosphoinositide-3-kinase interacting protein 1.
      
 0.506
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.