Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC106940424WD_REPEATS_REGION domain-containing protein. (228 aa)    
Predicted Functional Partners:
slu7
SLU7 homolog, splicing factor.
   
 0.943
dhx38
DEAH (Asp-Glu-Ala-His) box polypeptide 38.
   
 0.940
syf2
SYF2 pre-mRNA-splicing factor.
    
 0.939
cwc25
CWC25 spliceosome associated protein homolog.
    
 0.938
prpf18
PRP18 pre-mRNA processing factor 18 homolog (yeast).
   
 0.937
cwc22
CWC22 spliceosome associated protein homolog.
   
 0.935
dhx16
DEAH (Asp-Glu-Ala-His) box polypeptide 16.
   
 0.932
crnkl1
Crooked neck pre-mRNA splicing factor 1.
   
 0.922
xab2
XPA binding protein 2.
   
 0.922
cwf19l2
CWF19 like cell cycle control factor 2.
   
 0.915
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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