Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
oxa1lOXA1L mitochondrial inner membrane protein. (485 aa)    
Predicted Functional Partners:
malsu1
Si:zfos-1192g2.3.
  
 0.959
ENSPLAP00000001668
Coiled-coil-helix-coiled-coil-helix domain containing 1.
    
 
 0.958
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.953
mrps16
Mitochondrial ribosomal protein S16.
  
 
 0.935
mrpl47
Mitochondrial ribosomal protein L47.
   
 
 0.934
mrpl45
Mitochondrial ribosomal protein L45.
   
 
 0.926
mrpl2
Mitochondrial ribosomal protein L2.
   
 
 0.919
tufm
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.919
mrpl4
Mitochondrial ribosomal protein L4.
   
 
 0.915
mrpl17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.914
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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