STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106948560Uncharacterized protein. (476 aa)    
Predicted Functional Partners:
ENSPLAP00000020292
Uncharacterized protein.
    
 0.853
ranbp2
RAN binding protein 2.
    
 0.704
rbbp5
Retinoblastoma binding protein 5.
    
 0.686
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.676
LOC106956949
Lysine (K)-specific demethylase 6A, like.
    
 0.626
kdm6a
Lysine (K)-specific demethylase 6A.
    
 0.626
LOC106949253
Lysine (K)-specific demethylase 6B, b.
    
 0.626
LOC106935492
Lysine (K)-specific demethylase 6B, a.
    
 0.626
nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.596
ENSPLAP00000012682
Uncharacterized protein.
    
  0.595
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.