ENSPLAP00000001500 protein (Poecilia latipinna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSPLAP00000001500

Uncharacterized protein. (79 aa)

Predicted Functional Partners:

LOC106958028

0.666

palb2

0.616

ndufab1

0.616

aasdh

0.583

coq3

0.582

eci2

0.579

fdx1

0.577

fdx2

0.577

tkfc

0.575

isoc2

0.560

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000001500	LOC106958028	ENSPLAP00000001500	ENSPLAP00000027085	Uncharacterized protein.	Cytochrome P450, family 20, subfamily A, polypeptide 1.	0.666
ENSPLAP00000001500	aasdh	ENSPLAP00000001500	ENSPLAP00000014520	Uncharacterized protein.	Aminoadipate-semialdehyde dehydrogenase.	0.583
ENSPLAP00000001500	coq3	ENSPLAP00000001500	ENSPLAP00000020585	Uncharacterized protein.	Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.	0.582
ENSPLAP00000001500	eci2	ENSPLAP00000001500	ENSPLAP00000013316	Uncharacterized protein.	Enoyl-CoA delta isomerase 2.	0.579
ENSPLAP00000001500	fdx1	ENSPLAP00000001500	ENSPLAP00000010073	Uncharacterized protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.577
ENSPLAP00000001500	fdx2	ENSPLAP00000001500	ENSPLAP00000014673	Uncharacterized protein.	Ferredoxin 2.	0.577
ENSPLAP00000001500	isoc2	ENSPLAP00000001500	ENSPLAP00000026425	Uncharacterized protein.	Isochorismatase domain containing 2.	0.560
ENSPLAP00000001500	ndufab1	ENSPLAP00000001500	ENSPLAP00000010815	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.616
ENSPLAP00000001500	palb2	ENSPLAP00000001500	ENSPLAP00000004402	Uncharacterized protein.	PALB2_WD40 domain-containing protein.	0.616
ENSPLAP00000001500	tkfc	ENSPLAP00000001500	ENSPLAP00000010370	Uncharacterized protein.	Triokinase/FMN cyclase.	0.575
LOC106958028	ENSPLAP00000001500	ENSPLAP00000027085	ENSPLAP00000001500	Cytochrome P450, family 20, subfamily A, polypeptide 1.	Uncharacterized protein.	0.666
LOC106958028	aasdh	ENSPLAP00000027085	ENSPLAP00000014520	Cytochrome P450, family 20, subfamily A, polypeptide 1.	Aminoadipate-semialdehyde dehydrogenase.	0.767
LOC106958028	coq3	ENSPLAP00000027085	ENSPLAP00000020585	Cytochrome P450, family 20, subfamily A, polypeptide 1.	Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.	0.537
LOC106958028	ndufab1	ENSPLAP00000027085	ENSPLAP00000010815	Cytochrome P450, family 20, subfamily A, polypeptide 1.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.485
LOC106958028	palb2	ENSPLAP00000027085	ENSPLAP00000004402	Cytochrome P450, family 20, subfamily A, polypeptide 1.	PALB2_WD40 domain-containing protein.	0.485
aasdh	ENSPLAP00000001500	ENSPLAP00000014520	ENSPLAP00000001500	Aminoadipate-semialdehyde dehydrogenase.	Uncharacterized protein.	0.583
aasdh	LOC106958028	ENSPLAP00000014520	ENSPLAP00000027085	Aminoadipate-semialdehyde dehydrogenase.	Cytochrome P450, family 20, subfamily A, polypeptide 1.	0.767
aasdh	coq3	ENSPLAP00000014520	ENSPLAP00000020585	Aminoadipate-semialdehyde dehydrogenase.	Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.	0.406
aasdh	eci2	ENSPLAP00000014520	ENSPLAP00000013316	Aminoadipate-semialdehyde dehydrogenase.	Enoyl-CoA delta isomerase 2.	0.640
aasdh	isoc2	ENSPLAP00000014520	ENSPLAP00000026425	Aminoadipate-semialdehyde dehydrogenase.	Isochorismatase domain containing 2.	0.626