STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccnhCyclin H; Belongs to the cyclin family. (319 aa)    
Predicted Functional Partners:
mnat1
MNAT1 component of CDK activating kinase.
   
 0.993
cdk7
Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily.
    
 0.991
gtf2h3
General transcription factor IIH, polypeptide 3.
   
 0.991
ercc2
Excision repair cross-complementation group 2.
    
 0.986
gtf2h1
General transcription factor IIH, polypeptide 1.
    
 0.985
ercc3
Excision repair cross-complementation group 3.
    
 0.984
gtf2h4
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.982
gtf2h5
General transcription factor IIH, polypeptide 5.
    
 0.980
gtf2e1
General transcription factor IIE, polypeptide 1, alpha.
    
 0.977
polr2a
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.975
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.