Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
LOC106963384Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family. (553 aa)    
Predicted Functional Partners:
LOC106962286
Glutamine synthetase.
    
 
 0.558
LOC106962267
Glutamine synthetase.
    
 
 0.558
nrip1
Nuclear receptor interacting protein 1b.
      
 0.521
gpr153
G protein-coupled receptor 153.
   
  
 0.516
ca7
Carbonic anhydrase VII; Belongs to the alpha-carbonic anhydrase family.
   
  
 0.459
LOC106943057
Glutamine synthetase.
    
 
 0.447
LOC106937821
Glutamine synthetase-like.
    
 
 0.447
cct2
Chaperonin containing TCP1, subunit 2 (beta).
      
 0.436
LOC106952919
GLI pathogenesis related 1; Belongs to the CRISP family.
      
 0.434
otop2
Otopetrin 2.
   
  
 0.421
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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