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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106942044Uncharacterized protein. (676 aa)    
Predicted Functional Partners:
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.793
LOC106964102
TIMP metallopeptidase inhibitor 2a.
   
 0.770
LOC106936699
TIMP metallopeptidase inhibitor 2b.
   
 0.770
LOC106938824
Mothers against decapentaplegic homolog.
   
 
 0.619
ENSPLAP00000010547
Link domain-containing protein.
   
 0.604
timp4
TIMP metallopeptidase inhibitor 4, tandem duplicate 2.
    
 0.603
LOC106943754
Uncharacterized protein; Belongs to the peptidase C2 family.
   
  
 0.601
LOC106961192
Calpain 1, (mu/I) large subunit b; Belongs to the peptidase C2 family.
      
 0.593
LOC106959256
Calpain 1, (mu/I) large subunit a; Belongs to the peptidase C2 family.
      
 0.593
LOC106935684
Zgc:55262; Belongs to the peptidase C2 family.
      
 0.593
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.