Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106942044Uncharacterized protein. (676 aa)    
Predicted Functional Partners:
LOC106964102
TIMP metallopeptidase inhibitor 2a.
   
 0.717
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.709
LOC106936699
TIMP metallopeptidase inhibitor 2b.
   
 0.696
LOC106963636
Kit ligand a.
     
 0.654
ENSPLAP00000010547
Link domain-containing protein.
    
 0.639
LOC106947507
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.633
timp4
TIMP metallopeptidase inhibitor 4, tandem duplicate 2.
    
 0.560
LOC106961789
Heparin-binding EGF-like growth factor a.
   
 0.509
LOC106961845
Decorin; May affect the rate of fibrils formation.
    
 0.491
LOC106941825
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
     
 0.478
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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