Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dnah1Dynein, axonemal, heavy chain 1. (3905 aa)    
Predicted Functional Partners:
ENSPLAP00000025069
Uncharacterized protein.
   
 
 0.860
TTC29
Tetratricopeptide repeat domain 29.
   
 
 0.769
ENSPLAP00000014192
NDK domain-containing protein.
    
 
 0.767
dctn2
Dynactin 2 (p50).
    
 0.746
ENSPLAP00000017136
Uncharacterized protein.
   
 0.721
ENSPLAP00000018499
Uncharacterized protein.
   
 
 0.716
dnai1
Dynein, axonemal, intermediate chain 1, paralog 2.
   
 0.712
dnali1
Dynein, axonemal, light intermediate chain 1.
  
 
 0.708
LOC106938570
Uncharacterized protein.
   
 
 0.695
ENSPLAP00000015194
WD_REPEATS_REGION domain-containing protein.
   
 0.692
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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