Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sall2Si:ch211-212k18.5. (1210 aa)    
Predicted Functional Partners:
bsx
Brain-specific homeobox.
    
 0.666
ENSPLAP00000022982
Uncharacterized protein.
    
 0.585
wdr73
WD repeat domain 73.
    
  0.576
LOC106952289
Retinoblastoma binding protein 4.
    
  0.576
ENSPLAP00000014870
CAF1C_H4-bd domain-containing protein.
    
  0.576
crbn
Cereblon.
    
 
 0.558
gatad2b
GATA zinc finger domain containing 2B.
    
 0.557
LOC106954188
GATA zinc finger domain containing 2Ab.
    
 0.557
LOC106935698
Uncharacterized protein.
    
 0.557
bfsp2
Beaded filament structural protein 2, phakinin; Belongs to the intermediate filament family.
    
 
 0.548
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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