Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RAB29RAB29, member RAS oncogene family. (213 aa)    
Predicted Functional Partners:
rabggta
Rab geranylgeranyltransferase subunit alpha.
    
 0.903
LOC106937987
Zgc:92873.
    
   0.850
ENSPLAP00000019989
Uncharacterized protein.
    
 0.794
pm20d1
Peptidase M20 domain containing 1, tandem duplicate 2.
      
 0.741
gak
Cyclin G associated kinase.
    
 
 0.722
ppm1h
Protein phosphatase, Mg2+/Mn2+ dependent, 1H.
    
 
 0.686
LOC106964432
Protein phosphatase, Mg2+/Mn2+ dependent, 1J.
    
 
 0.686
chid1
Chitinase domain containing 1; Belongs to the glycosyl hydrolase 18 family.
      
 0.686
LOC106960942
PPM-type phosphatase domain-containing protein.
    
 
 0.686
LOC106943015
RH2 domain-containing protein.
      
 0.682
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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