STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106950553MFS domain-containing protein. (545 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2.
    
 0.703
LOC106946968
Organic cation transporter 2.
  
 
0.590
ints9
Integrator complex subunit 9.
    
 0.590
LOC106949242
Solute carrier family 22 member 2.
  
 
0.588
LOC106949243
Solute carrier family 22 member 2.
  
 
0.586
ints1
Integrator complex subunit 1.
    
 0.578
ints11
Integrator complex subunit 11.
    
 0.577
ints4
Integrator complex subunit 4.
    
 0.573
ints3
Integrator complex subunit 3.
    
 0.571
ints7
Integrator complex subunit 7.
    
 0.570
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.