Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC106957160Neurexin 3b. (885 aa)    
Predicted Functional Partners:
ENSPLAP00000024753
Uncharacterized protein.
 
     
0.812
cask
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.777
ENSPLAP00000015859
4.1m domain-containing protein.
 
      0.777
LOC106956946
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.777
LOC106945523
Neuroligin 1.
    
 0.703
ENSPLAP00000001896
4.1m domain-containing protein.
 
      0.682
ENSPLAP00000020760
Leucine rich repeat transmembrane neuronal 2.
    
 0.642
LOC106937787
Neuroligin 4 X-linked a.
    
 0.631
mpp1
Membrane protein, palmitoylated 1; Belongs to the MAGUK family.
    
 0.631
LOC106965165
Neuroligin 3a.
    
 0.615
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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