Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
spice1Spindle and centriole associated protein 1. (774 aa)    
Predicted Functional Partners:
ENSPLAP00000002985
Uncharacterized protein.
   
    0.962
cep120
Centrosomal protein 120.
   
 
 0.907
lum
Lumican.
      
 0.881
ENSPLAP00000009451
Uncharacterized protein.
    
   0.857
ENSPLAP00000016403
Neurexophilin and PC-esterase domain family, member 3.
    
   0.857
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
      
 0.857
haus5
HAUS augmin-like complex, subunit 5.
    
 
 0.821
pcm1
Pericentriolar material 1.
    
   0.795
wrap73
WD repeat containing, antisense to TP73.
    
 
 0.788
cep63
Centrosomal protein 63.
   
 
 0.786
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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