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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106938067Cryptochrome circadian regulator 3a. (654 aa)    
Predicted Functional Partners:
per1
Period circadian clock 1b.
   
 0.878
timeless
Timeless circadian clock.
    
 0.874
LOC106955727
Neuronal PAS domain protein 2.
    
 0.865
LOC106954374
Clock circadian regulator b.
    
 0.863
CLOCK
Clock circadian regulator a.
    
 0.863
arntl
Aryl hydrocarbon receptor nuclear translocator-like 1a.
   
 0.851
LOC106950927
Aryl hydrocarbon receptor nuclear translocator-like 2.
   
 0.848
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
   
 0.848
LOC106941729
PAS domain-containing protein.
   
 0.797
LOC106941719
Period circadian protein homolog 2-like.
   
 0.797
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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