Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
lyarLy1 antibody reactive homolog (mouse). (340 aa)    
Predicted Functional Partners:
LOC106936078
Uncharacterized protein.
   
 
 0.976
rpf2
Ribosome production factor 2 homolog.
   
   0.965
gpatch4
G patch domain containing 4.
   
 
 0.942
nhp2
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.940
imp3
IMP U3 small nucleolar ribonucleoprotein 3.
   
   0.928
pinx1
PIN2 (TERF1) interacting telomerase inhibitor 1.
   
   0.925
rpl7
Ribosomal protein L7.
   
 
 0.910
tma16
Translation machinery associated 16 homolog.
   
 
 0.909
nifk
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.908
mphosph10
U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family.
   
 
 0.907
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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