Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSPLAP00000001559Uncharacterized protein. (207 aa)    
Predicted Functional Partners:
LOC106963691
ZP domain-containing protein.
    
 0.570
ENSPLAP00000012548
ZP domain-containing protein.
    
 0.570
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.536
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.504
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.504
krit1
KRIT1 ankyrin repeat containing.
    
 
 0.502
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.476
ranbp2
RAN binding protein 2.
    
 0.457
LOC106945532
Si:ch73-335l21.4.
   
 0.454
LOC106936770
Mindbomb E3 ubiquitin protein ligase 2.
   
  0.453
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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