Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
synprSynaptoporin. (283 aa)    
Predicted Functional Partners:
vamp2
Vesicle-associated membrane protein 2.
   
 0.737
ENSPLAP00000009903
Vesicle-associated membrane protein 1.
   
 0.737
ENSPLAP00000021726
Zgc:92912.
   
 0.737
LOC106949858
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.694
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.694
gad2
Glutamate decarboxylase 2.
   
  
 0.654
acbd3
Acyl-Coenzyme A binding domain containing 3.
      
 0.645
VAMP3
Vesicle associated membrane protein 3.
   
 0.569
ENSPLAP00000005575
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
      
 0.519
ENSPLAP00000031021
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.518
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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