STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106953259Si:dkey-202e22.2. (578 aa)    
Predicted Functional Partners:
unc5a
Unc-5 netrin receptor A.
     
 0.746
neo1
Neogenin 1.
   
 0.745
ENSPLAP00000022093
Ig-like domain-containing protein.
   
 0.745
LOC106954291
Immunoglobulin superfamily, DCC subclass, member 4.
   
 0.698
itgb4
Integrin beta.
    
 0.635
LOC106957660
Uncharacterized protein.
     
 0.633
ripk4
Receptor-interacting serine-threonine kinase 4.
    
 0.633
ENSPLAP00000028939
Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily.
    
 0.633
LOC106936010
Unc-5 netrin receptor C.
     
 0.633
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.616
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.