Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC106963375PH domain-containing protein. (253 aa)    
Predicted Functional Partners:
LOC106955731
Ras-related GTP binding A.
    
 
 0.608
LOC106960370
Single-pass membrane protein with aspartate-rich tail 1b.
    
 0.571
smdt1
Single-pass membrane protein with aspartate-rich tail 1a.
    
 0.571
micu2
Mitochondrial calcium uptake 2.
    
 0.553
micu1
Mitochondrial calcium uptake 1.
    
 0.553
LOC106949964
MCU domain-containing protein.
    
 0.545
MCUB
Mitochondrial calcium uniporter dominant negative beta subunit.
    
 0.545
mcu
Mitochondrial calcium uniporter.
    
 0.545
ENSPLAP00000002053
Raptor_N domain-containing protein.
    
 
 0.494
rptor
Regulatory associated protein of MTOR, complex 1.
    
 
 0.494
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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