STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001590Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (621 aa)    
Predicted Functional Partners:
LOC106957545
Ubiquitin specific peptidase 18; Belongs to the peptidase C19 family.
   
 0.934
gak
Cyclin G associated kinase.
   
 0.924
rsad2
Radical S-adenosyl methionine domain containing 2.
   
  
 0.905
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
   
 0.806
LOC106954136
Intersectin 2b.
    
 
 0.781
pink1
PTEN induced kinase 1.
    
 0.781
ENSPLAP00000017806
Uncharacterized protein.
    
 
 0.781
ENSPLAP00000030866
Uncharacterized protein.
    
 
 0.781
ENSPLAP00000030875
Uncharacterized protein.
    
 
 0.781
LOC106945327
Uncharacterized protein.
   
 0.739
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.