Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001592Si:ch211-246m6.5. (240 aa)    
Predicted Functional Partners:
LOC106951180
Si:ch211-246m6.5.
 
     0.921
ENSPLAP00000028240
Uncharacterized protein.
 
      0.872
ttc9c
Tetratricopeptide repeat domain 9C.
    
 0.580
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.536
gnas
Uncharacterized protein.
      
 0.516
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.512
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.512
cdc27
Cell division cycle 27.
    
 0.485
LOC106939021
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
 0.479
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.479
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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