STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001598Gla domain-containing protein. (88 aa)    
Predicted Functional Partners:
LOC106962496
Runt-related transcription factor.
    
 0.603
runx2
Runt-related transcription factor.
    
 0.603
LOC106959954
Runt domain-containing protein.
    
 0.603
LOC106948392
Runt-related transcription factor.
    
 0.603
pth
Uncharacterized protein.
      
 0.551
mgp
Gla domain-containing protein.
      
 0.551
cbfb
Core-binding factor subunit beta.
     
 0.547
LOC106939916
Core-binding factor subunit beta.
     
 0.547
LOC106957301
TNF superfamily member 11; Belongs to the tumor necrosis factor family.
      
 0.545
acp5
Tartrate-resistant acid phosphatase type 5.
      
 0.529
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.