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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
naa38N(alpha)-acetyltransferase 38, NatC auxiliary subunit. (109 aa)    
Predicted Functional Partners:
naa35
N(alpha)-acetyltransferase 35, NatC auxiliary subunit.
    
 0.995
naa30
N(alpha)-acetyltransferase 30, NatC catalytic subunit.
    
 0.989
snrpe
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.972
snrpd2
Small nuclear ribonucleoprotein Sm D2.
   
 0.972
snrpd3
Small nuclear ribonucleoprotein Sm D3.
   
 0.972
ENSPLAP00000000084
Small nuclear ribonucleoprotein polypeptide F.
   
 0.971
snrpg
Small nuclear ribonucleoprotein G.
   
 0.967
eftud2
Elongation factor Tu GTP binding domain containing 2.
   
 0.958
sf3b4
Splicing factor 3b, subunit 4.
    
 0.950
sf3b2
Splicing factor 3b, subunit 2.
   
 0.950
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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