Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106942027Uncharacterized protein. (81 aa)    
Predicted Functional Partners:
timm13
Translocase of inner mitochondrial membrane 13 homolog (yeast); Belongs to the small Tim family.
   
  
 0.750
ighmbp2
Immunoglobulin mu DNA binding protein 2.
      
 0.721
ttc19
Tetratricopeptide repeat domain 19.
      
 0.685
LOC106953571
Ubiquinol-cytochrome c reductase complex assembly factor 2.
   
 
 0.681
LOC106955388
Ubiquinol-cytochrome c reductase, complex III subunit VII.
     
 0.676
LOC106946249
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
     
 0.668
LOC106937987
Zgc:92873.
      
 0.652
ENSPLAP00000001668
Coiled-coil-helix-coiled-coil-helix domain containing 1.
   
  
 0.567
LOC106943354
Cytochrome c-1.
     
 0.546
dmac2
Si:ch1073-228b5.2.
      
 0.519
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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