Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cidecCell death inducing DFFA like effector c. (218 aa)    
Predicted Functional Partners:
LOC106939401
Lipase, member Ib.
      
 0.698
dffa
DNA fragmentation factor, alpha polypeptide.
    
  0.688
ENSPLAP00000007200
ADAM_spacer1 domain-containing protein.
      
 0.623
dffb
DNA fragmentation factor, beta polypeptide (caspase-activated DNase).
    
 
 0.595
ccdc186
Si:ch211-225b10.4.
      
 0.577
tspan33
Tetraspanin.
      
 0.577
pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
      
 0.570
LOC106940574
Uncharacterized protein.
      
 0.525
fbln5
Fibulin 5.
      
 0.514
exo1
Exonuclease 1.
      
 0.514
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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