Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC106945986Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (860 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
   
 0.956
LOC106957547
Hematopoietic cell-specific Lyn substrate 1.
    
 0.941
cttn
Cortactin.
    
 0.938
dnm2
Dynamin 2a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
  
  
 
0.900
LOC106954136
Intersectin 2b.
    
 
 0.852
ENSPLAP00000017806
Uncharacterized protein.
    
 
 0.852
ENSPLAP00000030866
Uncharacterized protein.
    
 
 0.852
ENSPLAP00000030875
Uncharacterized protein.
    
 
 0.852
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
   
 0.807
LOC106957806
Uncharacterized protein.
    
 0.783
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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