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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106946594Uncharacterized protein. (308 aa)    
Predicted Functional Partners:
meaf6
MYST/Esa1-associated factor 6.
    
 0.867
ruvbl1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 0.848
dmap1
DNA methyltransferase 1 associated protein 1.
   
 0.799
ENSPLAP00000005858
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.769
ENSPLAP00000025105
Uncharacterized protein.
    
 0.769
ENSPLAP00000025116
Transformation/transcription domain-associated protein.
    
 0.769
atm
ATM serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 0.724
mcrs1
Microspherule protein 1.
    
 0.712
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.703
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.703
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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