Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fam83gFAM83 domain-containing protein. (824 aa)    
Predicted Functional Partners:
CSNK1A1
Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.
    
   0.581
LOC106964924
Family with sequence similarity 83 member D.
     
 0.548
gak
Cyclin G associated kinase.
    
   0.541
LOC106961789
Heparin-binding EGF-like growth factor a.
     
  0.499
LOC106962026
EGF-like domain-containing protein.
     
  0.451
ENSPLAP00000021432
EGF-like domain-containing protein.
     
  0.448
aamp
Angio-associated, migratory cell protein.
     
  0.446
LOC106940613
EGF-like domain-containing protein.
     
  0.426
LOC106956572
Biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino.
      
 0.416
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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