Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001683Uncharacterized protein. (622 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.757
ranbp2
RAN binding protein 2.
    
  0.621
LOC106946595
Anti-silencing function 1Ba histone chaperone.
    
 0.513
asf1b
Anti-silencing function 1Ba histone chaperone.
    
 0.513
rps27a
Ribosomal protein S27a.
   
  0.506
LOC106947675
Uncharacterized protein.
    
  0.486
actl6a
Actin-like 6A; Belongs to the actin family.
    
  0.471
rps15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.454
LOC106962437
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.454
ENSPLAP00000023604
Ribosomal protein S28.
   
   0.452
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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