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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106951176Ephrin RBD domain-containing protein; Belongs to the ephrin family. (200 aa)    
Predicted Functional Partners:
LOC106935896
Eph receptor A2 b.
   
 0.958
LOC106936590
Eph receptor A2 a.
   
 0.958
met
MET proto-oncogene, receptor tyrosine kinase.
   
 0.933
LOC106956234
Tyrosine-protein kinase receptor.
    
  0.925
insr
Tyrosine-protein kinase receptor.
    
  0.923
epha8
Uncharacterized protein.
   
 0.922
ENSPLAP00000023668
Tyrosine-protein kinase receptor.
    
 0.921
ENSPLAP00000016759
Nerve growth factor receptor a (TNFR superfamily, member 16).
     
 0.912
egfr
Receptor protein-tyrosine kinase.
    
  0.907
erbb2
Receptor protein-tyrosine kinase.
    
 0.901
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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