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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106945983TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (244 aa)    
Predicted Functional Partners:
ENSPLAP00000013918
TNFR-Cys domain-containing protein.
    
 0.976
ENSPLAP00000028279
TNFR-Cys domain-containing protein.
    
 0.976
LOC106955770
Uncharacterized protein.
   
 0.968
ENSPLAP00000007622
TNFR-Cys domain-containing protein.
    
 0.809
LOC106962561
Uncharacterized protein.
    
 0.809
TNFRSF11B
TNF receptor superfamily member 11b.
    
 0.772
LOC106962807
CD40 molecule, TNF receptor superfamily member 5.
    
 0.752
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.623
ENSPLAP00000029218
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
  
  
 
0.621
ENSPLAP00000019545
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
  
  
 
0.619
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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