Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001692Uncharacterized protein. (1120 aa)    
Predicted Functional Partners:
ENSPLAP00000020292
Uncharacterized protein.
   
 0.759
ENSPLAP00000031533
Uncharacterized protein.
  
 
0.691
ENSPLAP00000018903
Uncharacterized protein.
   
 
 0.656
LOC106945190
Bassoon (presynaptic cytomatrix protein) b.
   
 
 0.656
ranbp2
RAN binding protein 2.
    
 0.641
LOC106961733
Rap guanine nucleotide exchange factor (GEF) 4.
    
 
 0.569
tbc1d31
TBC1 domain family, member 31.
    
  0.562
rabac1
PRA1 family protein.
    
 
 0.543
LOC106944012
Uncharacterized protein.
   
 
 0.536
erc2
ELKS/RAB6-interacting/CAST family member 2.
   
 
 0.536
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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