STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001692Uncharacterized protein. (1120 aa)    
Predicted Functional Partners:
ENSPLAP00000020292
Uncharacterized protein.
   
 0.862
LOC106961733
Rap guanine nucleotide exchange factor (GEF) 4.
    
 0.798
ranbp2
RAN binding protein 2.
    
 0.704
rbbp5
Retinoblastoma binding protein 5.
    
 0.686
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.676
LOC106956949
Lysine (K)-specific demethylase 6A, like.
    
 0.626
kdm6a
Lysine (K)-specific demethylase 6A.
    
 0.626
LOC106949253
Lysine (K)-specific demethylase 6B, b.
    
 0.626
LOC106935492
Lysine (K)-specific demethylase 6B, a.
    
 0.626
RIMS2
Regulating synaptic membrane exocytosis 2.
   
  0.598
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.