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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106939620Uncharacterized protein. (219 aa)    
Predicted Functional Partners:
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.653
LOC106947246
Vang-like protein.
    
 0.640
VANGL2
Vang-like protein.
    
 0.639
VANGL1
Vang-like protein.
    
 0.639
LOC106957188
Vang-like protein.
    
 0.639
dvl3
Uncharacterized protein.
    
 0.619
dvl2
Dishevelled segment polarity protein 2.
    
 0.619
dvl1
Dishevelled segment polarity protein 1a.
    
 0.619
LOC106946946
Dishevelled segment polarity protein 3a.
    
 0.619
ENSPLAP00000028010
DIX domain-containing protein.
    
 0.619
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.