Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nxnl1Nucleoredoxin like 1. (221 aa)    
Predicted Functional Partners:
ankle1
Zgc:85936.
    
 
 0.561
LOC106941352
Uncharacterized protein.
   
  
 0.542
C8orf37
Chromosome 8 open reading frame 37.
      
 0.540
atxn10
Ataxin 10.
      
 0.536
LOC106936341
Leukotriene C4 synthase.
      
 0.526
KCNV2
Potassium voltage-gated channel modifier subfamily V member 2; Belongs to the potassium channel family.
   
  
 0.526
LOC106944669
Potassium channel, subfamily V, member 2b; Belongs to the potassium channel family.
   
  
 0.526
LOC106959243
Uncharacterized protein.
      
 0.522
med26
TFIIS N-terminal domain-containing protein.
      
 0.522
KCNN1
CaMBD domain-containing protein.
      
 0.522
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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