STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nxnl1Nucleoredoxin like 1. (221 aa)    
Predicted Functional Partners:
KCNN1
CaMBD domain-containing protein.
   
  
 0.598
LOC106959243
Uncharacterized protein.
      
 0.589
med26
TFIIS N-terminal domain-containing protein.
      
 0.589
slc35d1
Solute carrier family 35 member D1a.
      
 0.589
TNPO2
Transportin 2.
      
 0.589
tnpo2
Transportin 2 (importin 3, karyopherin beta 2b).
      
 0.589
UNC13A
Unc-13 homolog A.
      
 0.589
mast3
Microtubule associated serine/threonine kinase 3b.
      
 0.589
LOC106934625
Insulin-like 5a.
      
 0.588
asf1b
Anti-silencing function 1Ba histone chaperone.
      
 0.552
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.