Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
thsd7bThrombospondin, type I, domain containing 7Ba. (1133 aa)    
Predicted Functional Partners:
LOC106936355
C1q and TNF related 6a.
      
 0.685
AREL1
Apoptosis resistant E3 ubiquitin protein ligase 1.
      
 0.682
LOC106945134
Peptidoglycan recognition protein 5.
      
 0.642
tlk1
Tousled-like kinase 1a.
      
 0.544
shisa3
Shisa family member 3.
      
 0.537
LOC106936294
Phospholipase C, epsilon 1.
      
 0.535
adamts13
ADAM metallopeptidase with thrombospondin type 1 motif, 13.
     
 0.532
rcor2
REST corepressor 2.
      
 0.522
ddr2
Discoidin domain receptor tyrosine kinase 2a.
      
 0.520
nphs1
NPHS1 adhesion molecule, nephrin.
      
 0.513
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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