STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tango2Transport and golgi organization 2 homolog (Drosophila). (275 aa)    
Predicted Functional Partners:
mrpl40
Mitochondrial ribosomal protein L40.
      
 0.589
ufd1
Ubiquitin recognition factor in ER associated degradation 1.
      
 0.528
LOC106958562
Cytochrome c oxidase assembly factor COX18.
      
 0.502
mcm3ap
Minichromosome maintenance complex component 3 associated protein.
      
 0.501
LOC106939771
VPS37C subunit of ESCRT-I.
      
 0.489
ube2w
UBIQUITIN_CONJUGAT_2 domain-containing protein.
      
 0.482
lin37
Lin-37 DREAM MuvB core complex component.
      
 0.478
tomm22
Translocase of outer mitochondrial membrane 22 homolog (yeast).
      
 0.428
emc1
ER membrane protein complex subunit 1.
      
 0.414
dgcr2
DiGeorge syndrome critical region gene 2.
      
 0.414
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.