STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001718DUF4371 domain-containing protein. (681 aa)    
Predicted Functional Partners:
ENSPLAP00000014192
NDK domain-containing protein.
   
 0.551
wdr90
WD repeat domain 90.
    
 0.532
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.481
LOC106949456
Macrophage stimulating 1 receptor a.
    
  0.481
mst1r
Macrophage stimulating 1 receptor b.
    
  0.481
aasdh
Aminoadipate-semialdehyde dehydrogenase.
     
 0.429
ENSPLAP00000000961
Uncharacterized protein.
    
  0.419
TNS3
Tensin 3.
    
  0.419
LOC106937562
Uncharacterized protein.
    
  0.419
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
   
  0.419
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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