Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
btaf1BTAF1 RNA polymerase II, B-TFIID transcription factor-associated. (1859 aa)    
Predicted Functional Partners:
drap1
DR1-associated protein 1 (negative cofactor 2 alpha).
    
 
 0.966
dr1
Down-regulator of transcription 1.
    
 
 0.945
phf12
PHD finger protein 12b.
   
 
 0.938
supt3h
Uncharacterized protein.
    
 
 0.934
ENSPLAP00000005771
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 
 0.918
LOC106940150
CBFD_NFYB_HMF domain-containing protein.
    
 
 0.916
taf6l
TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor.
    
 
 0.905
ENSPLAP00000012054
Uncharacterized protein.
    
 
 0.904
tbp
TATA box binding protein.
    
 
 0.895
ENSPLAP00000024302
Uncharacterized protein.
    
 
 0.895
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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